EPIGENETIC STUDIES OF
GENOMIC RETROELEMENTS IN MAJOR PSYCHOSIS
A Petronis, RH Yolken, ZA Kaminsky, V Popendikyte, PX Kan
The
Krembil Family Epigenetics Laboratory, Centre for Addiction and Mental Health
and University of Toronto, Canada
This work
is dedicated to the exploration of the role of epigenetic factors in major
psychosis. One of the key functions of epigenetic modification of the genome of
eukaryotic cells is to suppress transcriptional activity of the retroelements.
Examples of retroelements are endogenous retroviral sequences (ERV’s),
Alu’s, and LINE’s, among others, which as a rule are
hypermethylated. There is evidence from schizophrenia and other human
complex diseases that some of the genomic retroelements become transcribed in
the affected tissues. Our goal was to screen DNA samples from post-mortem
brain tissues of individuals who were affected with major psychiatric illnesses
for retroelements that were located in the hypomethylated fraction of the
genomic DNA. Over 100 Alu sequences were cloned, sequenced, and mapped
to the human genome. A substantial portion of the cloned Alu’s are
located close to or within the genes and genomic regions that exhibit evidence
for genetic linkage and association to major psychosis. Genomic-wide epigenetic
study of the moiety of retroelements is now warranted, and I will discuss how
the microarray technology can be used for this purpose.